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Chemical Protein Stability Assay (CPSA)






























Chemical Protein Stability Assay (CPSA)

The Chemical Protein Stability Assay (CPSA) is our proprietary, scalable solution for assessing cellular protein-ligand or protein-drug binding – designed to meet the increasing demand for rapid, label-free, physiologically relevant engagement data in early drug discovery.

We have developed a proprietary cell lysate‐based chemical protein denaturation technology to confirm protein target engagement. This is accomplished by assessing binding-induced stabilisation in a simple mix-and-read, scalable, cost‐effective assay.

Determining ligand target engagement is an essential process for hit discovery and lead profiling, where simple and rapid approaches are highly valuable tools in the drug discovery toolbox. CPSA is unique in that it only requires mix-and-read steps within a single assay plate, giving a streamlined, cost‐effective workflow without transfer steps. The use of cell lysates avoids potential difficulties with the purification of protein targets.

CPSA is adept at handling diverse needs, from rapid evaluation of a few lead compounds to 1536-well screening of large-scale libraries. As it does not rely on target activity, CPSA has the potential to identify novel series that bind outside of the active site and move into novel chemical space.

CPSA can be applied at every step of the drug discovery process, regardless of which cellular matrix you choose. We can generate biologically relevant data that helps you identify and prioritise drug candidates faster.








“CPSA was designed to bring clarity and efficiency to early-stage screening. By combining a straightforward workflow with label-free, physiologically relevant data, we are helping researchers make faster, more confident decisions about their lead compounds.”

John Vincent, Lead Scientist







How CPSA works, and why it gives you better data

Our patented assay applies to a range of cellular protein targets and can be configured using a range of protein detection technologies, depending on the throughput required for analysis.

CPSA is a lysate‐based, single‐well, mix-and-read assay without plate transfers to measure target engagement. Chemical denaturants are utilised to unfold proteins, and target engagement is confirmed by measuring the increased stability imparted to the target by your chosen ligand. It is highly amenable to plate-based compound screening and can generate high‐quality data in both dose-response and single-point formats.

As a label-free method requiring no modification of target or ligand, the true pharmacology of the molecule is retained, giving CPSA broad scope and enhanced physiologic relevance. Cell lysate fits well with large‐scale applications where confounding cellular permeability effects are not desirable at early hit ID while avoiding issues with large‐scale protein purification.

The simplicity of the workflow and reagents reduces assay variability and produces consistent data. CPSA is broadly applicable to a wide range of cellular targets. Data generated using CPSA is comparable to that generated using established alternative techniques, which demonstrates the application of this technique to compound screening and hit-finding activities.








Advantages of Chemical Protein Stability Assay (CPSA)

CPSA combines simplicity, scalability, and scientific depth – offering several key advantages over traditional approaches:

  • Plate reader-based assay – accessible to most labs
  • Simple to run, scalable to HTS (384/1536)
  • High-temperature incubations are not required
  • No cell lysis and no material transfer steps improve variability
  • Utilises native protein as lysate
  • Cost-effective






How CPSA compares to standard protein stability assays

Current industry standard protein stability assay follows a process of high-temperature incubations, lysis steps, and plate-to-plate transfers, which can be time-consuming and yield inconsistencies:


CPSA diagram showing the current process

CPSA presents a simplified workflow suitable for HTS with relatively few steps. The use of lysate removes the need to generate isolated protein, and it does not require high-temperature incubations.


CPSA diagram showing the new process






See how we have helped innovators


CPSA is an ingenious extension of the target engagement toolbox. It is easier to upscale and control in high throughput screening applications than currently available methods. With exemplary support from MDC we have smoothly incorporated it into our Drug Discovery pipeline.

Selvita

MDC’s R&D consulting has been transformative, refining our HT8457S strategy with scientific rigour, identifying and mitigating risks, and strengthening our business model, significantly enhancing Haiku’s credibility.

Haiku Therapeutics

The partnership with MDC has allowed us to secure multiple Innovate UK grants and utilise capabilities such as state-of-the-art PET, which aren’t available elsewhere.

Alchemab Therapeutics

For the first time, we have been able to generate a map of lung fibrosis in 3D at the tissue scale. Collaborating with MDC has been key to its success. Their expertise has supported the successful integration of state-of-the-art technologies, establishing a valuable new resource for the lung fibrosis community.

University of Southampton

Working with MDC allowed us to visualise drug distribution in the brain with a level of clarity we hadn’t achieved before. Their expertise in DESI-MS and willingness to design a project that met our demands provided powerful insights into diffusion patterns, giving us confidence in our compound’s delivery.

TargTex

We worked with the Mass Spectrometry team at MDC to help set up and run a complex biochemical assay. The project was technically demanding, but the deep expertise, knowledge and collaborative approach allowed the team to troubleshoot the many challenges and successfully deliver a viable approach.

Oppilotech

The team at MDC shares our passion for bringing forward innovative medicines, pioneering new technologies, and operating with data-driven flexibility. They have been integral to our project success and possess unique capabilities to support later-stage candidate selection. A truly valued collaborator and dependable partner.

Artbio

Elasmogen was impressed by the quality and rapid delivery timelines for our radiopharmaceutical dosimetry data. There was good interactivity in this project, and we are happy to recommend this service.

Elasmogen

Our collaboration with Medicines Discovery Catapult will not only enable us to engage with the wider scientific community but will also allow us to unlock the potential of Acoustic Mass Spectrometry within drug discovery.

Innovative Medicines and Early Development (IMED) Biotech Unit, AstraZeneca

It’s been absolutely amazing working with MDC and the team.

LUNAC Therapeutics

MDC supported us in developing a therapeutic for Huntington’s Disease through antibody characterisation, iPSC model development, biodistribution studies, imaging and neurodegenerative expertise.

Alchemab Therapeutics

We worked together with MDC on a very challenging and demanding project. The MDC team’s expertise in MSI, commitment and flexibility were key to a successful collaboration and reaching our objectives.

TargTex

MDC are as involved in our project as the founding team, going above and beyond what I expected. I recommend them to new ventures starting out; even if you don’t know exactly what you need, the team can work with you to achieve some phenomenal results.

KLAS Therapeutics

Working with MDC has provided expertise and intellectual input. It has also enabled access to a wider network of companies providing specialist services.

N4 Pharma

By tapping into MDC’s unique drug development expertise and facilities, we are confident we will accelerate the preclinical development of our drug delivery system and its commercialisation.

Sixfold Bioscience

It has been a pleasure working with MDC as their scientists are pleasant and have a broad range of talents.
Importantly for projects like ours, they openly and professionally exchange ideas with SMi’s scientific team and keep us abreast of their research developments.

SMi Systems

It has been great to access the Artificial Intelligence expertise at Medicines Discovery Catapult.
The team has taken an innovative approach that adds value to our product and will benefit our customers.

BioAscent

As an SME, working with MDC allows us access to scientific know-how and in vivo imaging techniques that would be impossible through any other route. The closeness, timeliness and flexibility of the collaboration significantly accelerated our ability to develop the product.

Xerion Healthcare

We have collaborated with MDC for three years, and it continues to provide valuable and high-quality data on our molecules. MDC’s input has directly impacted operational and strategic decisions for our projects and allowed us to move forward with our clinical studies.

Revolo Biotherapeutics

For early-stage SMEs in this space, I thoroughly recommend engaging with MDC, who have the end-to-end knowledge in complex medicines, can support your in-house team and provide access to key equipment that start-ups may not have.

pHion Therapeutics








Ready to simplify your screening workflow and unlock more meaningful Target Engagement data?

Get in touch to explore how CPSA could support your drug discovery project. Whether you are profiling a few leads or running high-throughput screens.

Fill in the form today and speak to us to see how we can help advance your drug discovery project.